File Formats

• Introduction
• SCF
  • Header Record
  • Sample Points.
  • Sequence Information.
  • Comments.
  • Private data.
  • File structure.
  • Notes
    • Byte ordering and integer representation.
    • Compression of SCF Files
• ZTR
  • Header
  • Chunk Format
    • Data format 0 - Raw
    • Data format 1 - Run Length Encoding
    • Data format 2 - ZLIB
    • Data format 64/0x40 - 8-bit delta
    • Data format 65/0x41 - 16-bit delta
    • Data format 66/0x42 - 32-bit delta
    • Data format 67-69/0x43-0x45 - reserved
    • Data format 70/0x46 - 16 to 8 bit conversion
    • Data format 71/0x47 - 32 to 8 bit conversion
    • Data format 72/0x48 - "follow" predictor
    • Data format 73/0x49 - floating point 16-bit chebyshev polynomial predictor
    • Data format 74/0x4A - integer based 16-bit chebyshev polynomial predictor
  • Chunk Types
    • SAMP
    • SMP4
    • BASE
    • BPOS
    • CNF4
    • TEXT
    • CLIP
    • CR32
    • COMM
  • Text Identifiers
  • References
• Experiment File
  • Records
  • Explanation of Records
  • Example
  • Unsupported Additions (From LaDeana Hillier)
• Restriction Enzyme File
• Vector_primer File
• Vector Sequence Format
• Index

This document was generated on 5 July 2006 using the texi2html translator version 1.39 (with local modifications)